MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-30-P1d

Family name MIR-30 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-30e
Paralogues Hsa-Mir-30-P1a  Hsa-Mir-30-P1b  Hsa-Mir-30-P2a  Hsa-Mir-30-P2b  Hsa-Mir-30-P2d 
Orthologues Aca-Mir-30-P1d  Ami-Mir-30-P1d  Bta-Mir-30-P1d  Cfa-Mir-30-P1d  Cja-Mir-30-P1d  Cli-Mir-30-P1d  Cmi-Mir-30-P1d3  Cmi-Mir-30-P1d4  Cpi-Mir-30-P1d  Cpo-Mir-30-P1d  Dno-Mir-30-P1d  Dre-Mir-30-P1d  Eca-Mir-30-P1d  Ete-Mir-30-P1d  Gga-Mir-30-P1d  Gja-Mir-30-P1d  Gmo-Mir-30-P1d  Laf-Mir-30-P1d  Lch-Mir-30-P1d  Loc-Mir-30-P1d  Mal-Mir-30-P1d  Mdo-Mir-30-P1d  Mml-Mir-30-P1d  Mmr-Mir-30-P1d  Mmu-Mir-30-P1d  Mun-Mir-30-P1d  Neu-Mir-30-P1d  Oan-Mir-30-P1d  Ocu-Mir-30-P1d  Pab-Mir-30-P1d  Pbv-Mir-30-P1d  Rno-Mir-30-P1d  Sha-Mir-30-P1d  Spt-Mir-30-P1d  Sto-Mir-30-P1d3  Sto-Mir-30-P1d4  Tgu-Mir-30-P1d  Tni-Mir-30-P1d  Xla-Mir-30-P1d1  Xla-Mir-30-P1d2  Xtr-Mir-30-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(hg38)		 chr1: 40754371-40754434 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-30-P1d)		 Mir-30-P1d chr1: 40754371-40754434 [+] UCSC Ensembl
Mir-30-P2d chr1: 40757300-40757360 [+] UCSC Ensembl
Seed GUAAACA
Precursor
(pre-Mir +30nt flank)		 
UCUCCGUUCUUUCUGGGCAGUCUUUGCUACUGUAAACAUCCUUGACUGGAAGCUGUAAGGUGUUCAGAGGAGCUUUCAGUCGGAUGUUUACAGCGGCAGGCUGCCACGGUCGUCCCCAGCUACG
Get precursor sequence
Structure
        10            20        30        40        50        60  
UCUCCGUUCUUUCUGGG----|     UU  UA            UU           GUAAGGU 
                     CAGUCU  GC  CUGUAAACAUCC  GACUGGAAGCU       G
                     GUCGGA  CG  GACAUUUGUAGG  CUGACUUUCGA       U
GCAUCGACCCCUGCUGGCACC^     --  GC            --           GGAGACU 
  120       110       100          90          80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-30-P1d_5p
mirBase accessionMIMAT0000692
Sequence 
0- UGUAAACAUCCUUGACUGGAAGCU -24
Get sequence
Proposed targets microrna.org: MIMAT0000692
TargetScanVert: hsa-miR-30e-5p
TargetMiner: hsa-miR-30e-5p
miRDB: MIMAT0000692
Star sequence

Hsa-Mir-30-P1d_3p*
mirBase accessionMIMAT0000693
Sequence 
42- CUUUCAGUCGGAUGUUUACAGC -64
Get sequence
Proposed targets microrna.org: MIMAT0000693
TargetScanVert: hsa-miR-30e-3p
TargetMiner: hsa-miR-30e-3p
miRDB: MIMAT0000693