MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-12380

Family name MIR-12380 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-12380
Paralogues
Orthologues Neu-Mir-12380  Sha-Mir-12380 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)		 6: 214307234-214307289 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12380)		 Mir-12380 6: 214307234-214307289 [-] UCSC Ensembl
Mir-7332 6: 214337424-214337486 [-] UCSC Ensembl
Seed UCCCUCC
Precursor
(pre-Mir +30nt flank)		 
CUUCCAUGCAGUGUCCAGCCUGGGCACUCAUUCCCUCCUACGGCUCUCUGCAGAGGUACCAGAUGCAGAGGGAGGAGGUUGGGAUGAGUACUUAUGGCAGUGAUGCACCUUAGUAC
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Structure
        10         20         30        40        50        
CUUCCAUGCAGUGUCCA-   -|   C         CU   ACGG         GAGGU 
                  GCC UGGG ACUCAUUCC  CCU    CUCUCUGCA     \
                  CGG AUUC UGAGUAGGG  GGA    GGGAGACGU     A
CAUGAUUCCACGUAGUGA   U^   A         UU   GGA-         AGACC 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-12380_5p
mirBase accessionMIMAT0050323
Sequence 
0- UUCCCUCCUACGGCUCUCUGCA -22
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Star sequence

Mdo-Mir-12380_3p* (predicted)
mirBase accessionMIMAT0050324
Sequence 
35- CAGAGGGAGGAGGUUGGGAUG -56
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