MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-12380

Family name MIR-12380 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Mdo-Mir-12380  Neu-Mir-12380 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL841586.1: 3856147-3856202 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12380)		 Mir-12380 GL841586.1: 3856147-3856202 [-] UCSC Ensembl
Mir-7332 GL841586.1: 3883819-3883881 [-] UCSC Ensembl
Seed UCCCUCC
Precursor
(pre-Mir +30nt flank)		 
CUUUCCCGCCAUGUACAGCCUGGGUACUCAUUCCCUCCUACGGCUCUCUGCAGAGGUACCAGAUGCAGAGGGAGGAGGUUGGGAUGAGUACUUAUGGCAGUGAUGCACCUUAAUGC
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Structure
        10         20         30        40        50        
CUUUCCCGCCAUGUACA-   -|             CU   ACGG         GAGGU 
                  GCC UGGGUACUCAUUCC  CCU    CUCUCUGCA     \
                  CGG AUUCAUGAGUAGGG  GGA    GGGAGACGU     A
CGUAAUUCCACGUAGUGA   U^             UU   GGA-         AGACC 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-12380_5p
mirBase accessionNone
Sequence 
0- UUCCCUCCUACGGCUCUCUGCA -22
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Star sequence

Sha-Mir-12380_3p*
mirBase accessionNone
Sequence 
35- CAGAGGGAGGAGGUUGGGAUG -56
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