MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-12473

Family name MIR-12473 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Mdo-Mir-12473  Sha-Mir-12473-v1 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051814.1: 55858228-55858287 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12473)		 Novel-7 CM051814.1: 55852830-55852887 [+] UCSC Ensembl
Mir-12473 CM051814.1: 55858228-55858287 [+] UCSC Ensembl
Seed AUAUCAG
Precursor
(pre-Mir +30nt flank)		 
CAGGGGAGCCAGCAGGGAUGGCGCCCUGGGGCACUUGCCAGAUCCUGAGGUUCUUGGUGCCUACUAGAAUAUCAGAGCUGGCAGGAACUCCAGAGGUCAUCUGGUCCAACCCCCUCCUUU
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Structure
        10           20         30        40        50          
CAGGGGAGCCAGCAGGG---|  GC   -      CA        AUC    G     UGGUG 
                    AUG  GCC CUGGGG  CUUGCCAG   CUGA GUUCU     \
                    UAC  UGG GACCUC  GGACGGUC   GACU UAAGA     C
UUUCCUCCCCCAACCUGGUC^  --   A      AA        GA-    A     UCAUC 
.       110       100          90        80         70
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-12473_5p*
mirBase accessionNone
Sequence 
0- GCACUUGCCAGAUCCUGAGGUUCU -24
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Mature sequence

Neu-Mir-12473_3p
mirBase accessionNone
Sequence 
37- AAUAUCAGAGCUGGCAGGAACUC -60
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