MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-12475-o3

Family name MIR-12475 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-12475-o1a  Neu-Mir-12475-o1b  Neu-Mir-12475-o2  Neu-Mir-12475-o4 
Orthologues Sha-Mir-12475-P3 
Node of Origin (locus) N. eugenii
Node of Origin (family) Australidelphia
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 94990246-94990306 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12475-o3)		 Novel-2 CM051820.1: 94966100-94966159 [+] UCSC Ensembl
Mir-12475-o1a CM051820.1: 94978259-94978318 [+] UCSC Ensembl
Mir-12475-o1b CM051820.1: 94987478-94987537 [+] UCSC Ensembl
Mir-12475-o3 CM051820.1: 94990246-94990306 [+] UCSC Ensembl
Mir-12475-o2 CM051820.1: 95012989-95013048 [+] UCSC Ensembl
Mir-12475-o4 CM051820.1: 95032444-95032501 [+] UCSC Ensembl
Seed CGUCGUU
Precursor
(pre-Mir +30nt flank)		 
GGGCUGCAUUUUGAAGUGCUGAGGUACCACUCGUCGUUCUGGGGAUGCAUUGUUGCGUGACUGUUGAAACAGUGCGUCUCAGAUCGGGAGUUGUCCCUCAGAAUCCUCAUCAUGUUCUUCC
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Structure
        10          20        30        40        50        60 
GGGCUGCAUUUUGAAGUG--|     U  C    G   U      G          GCGUGA 
                    CUGAGG AC ACUC UCG UCUGGG AUGCAUUGUU      \
                    GACUCC UG UGAG GGC AGACUC UGCGUGACAA      C
CCUUCUUGUACUACUCCUAA^     C  U    -   U      -          AGUUGU 
 .       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-12475-o3_5p
mirBase accessionNone
Sequence 
0- UCGUCGUUCUGGGGAUGCAUUGUU -24
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Star sequence

Neu-Mir-12475-o3_3p*
mirBase accessionNone
Sequence 
39- CAGUGCGUCUCAGAUCGGGAGU -61
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