MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-12475-o4

Family name MIR-12475 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-12475-o1a  Neu-Mir-12475-o1b  Neu-Mir-12475-o2  Neu-Mir-12475-o3 
Orthologues Sha-Mir-12475-P4 
Node of Origin (locus) N. eugenii
Node of Origin (family) Australidelphia
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 95032444-95032501 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12475-o4)		 Mir-12475-o1b CM051820.1: 94987478-94987537 [+] UCSC Ensembl
Mir-12475-o3 CM051820.1: 94990246-94990306 [+] UCSC Ensembl
Mir-12475-o2 CM051820.1: 95012989-95013048 [+] UCSC Ensembl
Mir-12475-o4 CM051820.1: 95032444-95032501 [+] UCSC Ensembl
Seed CACUUCU
Precursor
(pre-Mir +30nt flank)		 
UGCUGCAUUUUUAGCUGCUGAGGUCCCACUACACUUCUGAAGACACAUUGUUCUCUGACUGUUCAAACAAUGUGUCUCAGAUGGGUAAUGGUGCCUUAAAAUCCUCCUCAUUUUCUUC
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Structure
        10          20        30        40        50         
UGCUGCAUUUUUAGCUGC--|    UC   C   ACU     A           CUCUGA 
                    UGAGG  CCA UAC   UCUGA GACACAUUGUU      \
                    AUUCC  GGU AUG   AGACU CUGUGUAACAA      C
CUUCUUUUACUCCUCCUAAA^    GU   A   GGU     -           ACUUGU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-12475-o4_5p
mirBase accessionNone
Sequence 
0- ACACUUCUGAAGACACAUUGUUC -23
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Star sequence

Neu-Mir-12475-o4_3p*
mirBase accessionNone
Sequence 
36- ACAAUGUGUCUCAGAUGGGUAA -58
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