| MirGeneDB ID | Neu-Mir-1397 |
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| Family name |
MIR-1397 (all species) |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aca-Mir-1397
Ami-Mir-1397
Cpi-Mir-1397
Gga-Mir-1397
Gja-Mir-1397
Oan-Mir-1397
Pbv-Mir-1397
Sha-Mir-1397
Spt-Mir-1397
Tgu-Mir-1397
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| Node of Origin (locus) |
Amniota
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| Node of Origin (family) |
Amniota
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 388872773-388872830 [+]
UCSC
Ensembl
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| Seed |
GCAUUGC |
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Precursor
(pre-Mir +30nt flank) |
UAAGUCACCGACACAUUGCGGUGUGUGCAUUGCAUUGCGACGGGUUACAUCACUGAAUUUAGCAUGAUGUAACCCAACGCAGCAUGAUGUAAGCAUUGUCAUACGUUGGAGGCUUAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UAAGUCACCGACACAUU--| G CA AC CUGAA
GCGGUGU UGCAUUG UUGCG GGGUUACAUCA U
UGUUACG AUGUAGU GACGC CCCAAUGUAGU U
AAAUUCGGAGGUUGCAUAC^ A AC AA ACGAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-1397_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- UGCAUUGCGACGGGUUACAUCA -22
Get sequence
|
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| Star sequence |
Neu-Mir-1397_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
36- AUGUAACCCAACGCAGCAUGAU -58
Get sequence
|
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