MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-1546-as

Family name MIR-1546 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-1546 
Orthologues Mdo-Mir-1546  Mdo-Mir-1546-as  Sha-Mir-1546  Sha-Mir-1546-as 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051816.1: 16147637-16147695 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1546-as)		 Mir-1546-as CM051816.1: 16147637-16147695 [-] UCSC Ensembl
Mir-1546 CM051816.1: 16147638-16147697 [+] UCSC Ensembl
Seed AGGGAUU
Precursor
(pre-Mir +30nt flank)		 
UUGUAGUUGGAGCUGCGCCUUGAAAGAAAAUAGGGAUUCUGAGAGGUGGAAGGUAUUUUGUCUCACUUCCAUCCCUGAGAAUCCCUGAUUUCCGGCAAGGCAUUCUUCAAGCCAUUUUU
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Structure
        10          20        30        40        50         
UUGUAGUUGGAGCUGCG--|    AAA    A          G  A        GUAUUU 
                   CCUUG   GAAA UAGGGAUUCU AG GGUGGAAG      \
                   GGAAC   CUUU GUCCCUAAGA UC CUACCUUC      U
UUUUUACCGAACUUCUUAC^    GGC    A          G  C        ACUCUG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-1546-as_5p
mirBase accessionNone
Sequence 
0- UAGGGAUUCUGAGAGGUGGAAG -22
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Star sequence

Neu-Mir-1546-as_3p* (predicted)
mirBase accessionNone
Sequence 
37- UCCAUCCCUGAGAAUCCCUGAU -59
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