| MirGeneDB ID | Neu-Mir-3613 |
| Family name |
MIR-3613 (all species) |
| Species |
Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-3613
Cfa-Mir-3613
Cja-Mir-3613
Cpo-Mir-3613
Dno-Mir-3613
Eca-Mir-3613
Ete-Mir-3613
Hsa-Mir-3613
Laf-Mir-3613
Mdo-Mir-3613
Mml-Mir-3613
Mmr-Mir-3613
Ocu-Mir-3613
Pab-Mir-3613
Sha-Mir-3613
|
| Node of Origin (locus) |
Theria
|
| Node of Origin (family) |
Theria
|
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 106341777-106341835 [+]
UCSC
Ensembl
|
| Seed |
GUUGUAC |
Precursor (pre-Mir +30nt flank) |
ACGACGGCUCCGAGACGGUCGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUUUAUUUUUAGGAACAAAAAAAAAAGCCCAACCCUUCACGCCGCUUCCCCCGCAUCUCUCCAGAC
Get precursor sequence
|
| Structure | 10 20 30 40 50
ACGACGGCUCCGAGACGGUCG--| U UU UA GUUUUA
GGU UGGA GUUG CUUUUUUUUUUGUUC \
CCG ACUU CAAC GAAAAAAAAAACAAG U
CAGACCUCUCUACGCCCCCUUCG^ C CC CC GAUUUU
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Mature sequence |
Neu-Mir-3613_5p |
| mirBase accession | None |
| Sequence |
0- UGUUGUACUUUUUUUUUUGUUC -22
Get sequence
|
| Co-mature sequence |
Neu-Mir-3613_3p |
| mirBase accession | None |
| Sequence |
37- ACAAAAAAAAAAGCCCAACCCU -59
Get sequence
|