| MirGeneDB ID | Npo-Mir-252-P2 |
|---|---|
| Family name | MIR-252 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | Npo-Mir-252-P1 |
| Orthologues | Aae-Mir-252-P2 Aga-Mir-252-P2 Agr-Mir-252-P2 Bfl-Mir-252-P2 Bge-Mir-252-P2-v1 Bla-Mir-252-P2 Cbr-Mir-252-P2 Cel-Mir-252-P2 Csc-Mir-252-P2k Csc-Mir-252-P2l-v1 Cte-Mir-252-P2 Dan-Mir-252-P2-v1 Dlo-Mir-252-P2 Dma-Mir-252-P2-v1 Dme-Mir-252-P2-v1 Dmo-Mir-252-P2-v1 Dpu-Mir-252-P2-v1 Dsi-Mir-252-P2-v1 Dya-Mir-252-P2-v1 Eba-Mir-252-P2 Gpa-Mir-252-P2 Hme-Mir-252-P2 Hru-Mir-252-P2 Isc-Mir-252-P2-v1 Lan-Mir-252-P2 Lgi-Mir-252-P2 Llo-Mir-252-P2 Lpo-Mir-252-P2c Lpo-Mir-252-P2d Mgi-Mir-252-P2 Mom-Mir-252-P2 Ofu-Mir-252-P2 Pau-Mir-252-P2 Pcr-Mir-252-P2 Pdu-Mir-252-P2 Pfl-Mir-252-P2 Pmi-Mir-252-P2 Pve-Mir-252-P2 Sko-Mir-252-P2 Snu-Mir-252-P2 Spu-Mir-252-P2 Tca-Mir-252-P2 Tur-Mir-252-P2-v1 War-Mir-252-P2 Xbo-Mir-252-P2 |
| Node of Origin (locus) | Bilateria |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_018389105_NPO) |
JACATO010000601.1: 30774-30835 [+] Ensembl |
| Clustered miRNAs (< 50kb from Mir-252-P2) |
Mir-2001
JACATO010000601.1: 22889-22948 [+]
Ensembl
Mir-252-P1 JACATO010000601.1: 25040-25096 [+] Ensembl Mir-252-P2 JACATO010000601.1: 30774-30835 [+] Ensembl |
| Seed | UAAGUAC |
| Precursor (pre-Mir +30nt flank) |
ACCGAUCAGUUAAGCAGGCUUGAUACCCUUCUAAGUACUGGUGCCGCGGGAGUCUUUUUUGUAUACUUCUCCAGCGACCCUGGUGCUUAACAGGGAGUCAGGAGGUUGUCGUCAUCUUAAGGGet precursor sequence |
| Structure | 10 20 30 40 50 60 ACCGAUCAGUUAAGCAGG--| A UC UG UGC G UCUUUUU CUUGAU CCCU UAAGUAC G CGC GGAG U GGACUG GGGA AUUCGUG C GCG CCUC G GGAAUUCUACUGCUGUUGGA^ A CA GU CCA A UUCAUAU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Npo-Mir-252-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CUAAGUACUGGUGCCGCGGGAG -22
Get sequence
|
| Star sequence | Npo-Mir-252-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- UCCAGCGACCCUGGUGCUUAACA -62
Get sequence
|
