MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-12517-P1

Family name MIR-12517 (all species)
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Mir-12517-P2 
Orthologues Esc-Mir-12517  Obi-Mir-12517-P1 
Node of Origin (locus) Octopus
Node of Origin (family) Coleoidea
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01008960.1: 6297-6357 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-12517-P1)		 Mir-12517-P1 RXHP01008960.1: 6297-6357 [+] Ensembl
Mir-12517-P2 RXHP01008960.1: 7572-7631 [+] Ensembl
Seed UCGGGAG
Precursor
(pre-Mir +30nt flank)		 
AGAAAAGGCUGUAUAAAUUGCAUGCACAGUCAUCUGACUUAACUCCUGCAAGGCUAAUUAAAACACAUCCUCGGGAGAGAAGUGAGAUGGCGUGCAUUAGCUUUCGAAACUUCAACAAGGA
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Structure
        10         20          30        40        50        60 
AGAAAAGGCUGUAUAAAUU-  --|     A       G    AA      CA   CUAAUUA 
                    GC  AUGCAC GUCAUCU ACUU  CUCCUG  AGG       \
                    CG  UACGUG CGGUAGA UGAA  GAGGGC  UCC       A
AGGAACAACUUCAAAGCUUU  AU^     -       G    GA      --   UACACAA 
 .       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-12517-P1_5p*
mirBase accessionNone
Sequence 
0- CAUCUGACUUAACUCCUGCAAGGC -24
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Mature sequence

Ovu-Mir-12517-P1_3p
mirBase accessionNone
Sequence 
39- CUCGGGAGAGAAGUGAGAUGGC -61
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