MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-12517-P2

Family name MIR-12517 (all species)
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Mir-12517-P1 
Orthologues Esc-Mir-12517  Obi-Mir-12517-P2 
Node of Origin (locus) Octopus
Node of Origin (family) Coleoidea
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01008960.1: 7572-7631 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-12517-P2)		 Mir-12517-P1 RXHP01008960.1: 6297-6357 [+] Ensembl
Mir-12517-P2 RXHP01008960.1: 7572-7631 [+] Ensembl
Seed UCGGGAG
Precursor
(pre-Mir +30nt flank)		 
ACAUAGGACAAAGUUACUAGCAUGCACGACCAUCUGACUUGCCUCCUGCGGAACACAAUCUGCAUAUCCUCGGGAGACAAGUGAGAUGUCGUGCAUUAGCUGAUGAGACUACAGUCCUGA
Get precursor sequence
Structure
        10         20          30        40        50         
ACAUAGGACAAAGUUAC-    --|        C    G     C      C   ACACAA 
                  UAGC  AUGCACGAC AUCU ACUUG CUCCUG GGA      U
                  GUCG  UACGUGCUG UAGA UGAAC GAGGGC CCU      C
AGUCCUGACAUCAGAGUA    AU^        -    G     A      U   AUACGU 
.       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-12517-P2_5p*
mirBase accessionNone
Sequence 
0- CAUCUGACUUGCCUCCUGCGGA -22
Get sequence
Mature sequence

Ovu-Mir-12517-P2_3p
mirBase accessionNone
Sequence 
38- CUCGGGAGACAAGUGAGAUGUC -60
Get sequence