| MirGeneDB ID | Pbv-Mir-1805 |
| Family name |
MIR-1805 (all species) |
| Species |
Burmese python (Python bivittatus) |
| MiRBase ID |
pbv-mir-1805
|
| Paralogues |
|
| Orthologues |
Aca-Mir-1805
Ami-Mir-1805
Cli-Mir-1805
Cpi-Mir-1805
Gga-Mir-1805
Gja-Mir-1805-P3
Gja-Mir-1805-P4
Mdo-Mir-1805
Neu-Mir-1805
Sha-Mir-1805
Spt-Mir-1805
Tgu-Mir-1805
Xla-Mir-1805-P1
Xla-Mir-1805-P2
Xtr-Mir-1805
|
| Node of Origin (locus) |
Tetrapoda
|
| Node of Origin (family) |
Tetrapoda
|
Genome context (GCA_000186305.2_Python_molurus_bivittatus) |
KE957885.1: 57331-57391 [+]
|
| Seed |
GUAUUGG |
Precursor (pre-Mir +30nt flank) |
GCAGGAUAUGAAAGAAUGGAAUAUUCUAGGAGUUGUAGUGUUUCAAACAGAGCUUUGCAAGAACAUACCUGUAUUGGAACACUACAGCUCCAGGAACUUCCUAGUGUCACUGGCUGUGAAA
Get precursor sequence
|
| Structure | 10 20 30 40 50
GCAGGAUAUGAAAGAAU---| UA A - AGCUUUGC
GGAA UUCU GGAGUUGUAGUGUUUCAA ACAG A
CCUU AAGG CCUCGACAUCACAAGGUU UGUC A
AAAGUGUCGGUCACUGUGAU^ C- A A CAUACAAG
. 110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | UG at 5p(-14) |
Tissue expression
|
|
| Star sequence |
Pbv-Mir-1805_5p* |
| mirBase accession | MIMAT0039087 |
| Sequence |
0- AGUUGUAGUGUUUCAAACAGA -21
Get sequence
|
| Mature sequence |
Pbv-Mir-1805_3p |
| mirBase accession | MIMAT0039088 |
| Sequence |
39- UGUAUUGGAACACUACAGCUCC -61
Get sequence
|