MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-2-o148

Family name MIR-2 (all species)
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-2-o139  Pca-Mir-2-o140  Pca-Mir-2-o141  Pca-Mir-2-o142  Pca-Mir-2-o143  Pca-Mir-2-o144  Pca-Mir-2-o145  Pca-Mir-2-o146  Pca-Mir-2-o147  Pca-Mir-2-o149  Pca-Mir-2-o150  Pca-Mir-2-o151  Pca-Mir-2-o152 
Orthologues Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) P. caudatus
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)		 KQ715780.1: 18746-18808 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o148)		 Mir-2-o146 KQ715780.1: 17587-17642 [+] UCSC Ensembl
Mir-2-o147 KQ715780.1: 17758-17818 [+] UCSC Ensembl
Mir-2-o148 KQ715780.1: 18746-18808 [+] UCSC Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
CGGAGGUCGACGCGAGGUCGCGUGCGGCGCCCAUCAAAGUGACUGUGAUGUGCUUCACGAGUGGGAUUCAUAUCACAGCCAGCUUUGAUGAGUGUCUCGCGUGCAGACACGUCAUGCAGACGU
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Structure
        10          20        30        40         50        60
CGGAGGUCGACGCGAGGU--      C     C         GA-|         CUUCACG 
                    CGCGUG GGCGC CAUCAAAGU   CUGUGAUGUG       A
                    GUGCGC CUGUG GUAGUUUCG   GACACUAUAC       G
UGCAGACGUACUGCACAGAC      U     A         ACC^         UUAGGGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Gi In To
Star sequence

Pca-Mir-2-o148_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCAUCAAAGUGACUGUGAUGUG -22
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Mature sequence

Pca-Mir-2-o148_3p
mirBase accessionNone
Sequence 
40- UAUCACAGCCAGCUUUGAUGAGU -63
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