MirGeneDB 3.0
MirGeneDB ID

Pcr-Mir-1175-P13

Family name MIR-1175 (all species)
Species Tiger flatworm (Prostheceraeus crozieri )
MiRBase ID
Paralogues Pcr-Mir-1175-P12-v1 
Orthologues Aae-Mir-1175  Agr-Mir-1175  Asu-Mir-1175  Bge-Mir-1175  Bko-Mir-1175  Bpl-Mir-1175  Cte-Mir-1175  Dan-Mir-1175  Dgr-Mir-1175  Dlo-Mir-1175  Dma-Mir-1175  Dme-Mir-1175  Dmo-Mir-1175  Dpu-Mir-1175  Dsi-Mir-1175  Eba-Mir-1175  Gpa-Mir-1175  Gsa-Mir-1175  Gsp-Mir-1175  Hme-Mir-1175  Hru-Mir-1175  Isc-Mir-1175  Lan-Mir-1175  Lgi-Mir-1175  Llo-Mir-1175  Mgi-Mir-1175  Mom-Mir-1175  Npo-Mir-1175  Obi-Mir-1175  Ofu-Mir-1175  Ovu-Mir-1175  Pau-Mir-1175  Pca-Mir-1175  Pdu-Mir-1175  Pve-Mir-1175  Rph-Mir-1175  Sma-Mir-1175  Sne-Mir-1175  Snu-Mir-1175  Tca-Mir-1175  War-Mir-1175 
Node of Origin (locus) P. crozeri
Node of Origin (family) Protostomia
Genome context
(GCA_907163375.1_PROCRO_GENOME_genomic)		 CAJQUW010014532.1: 635749-635807 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1175-P13)		 Mir-1175-P13 CAJQUW010014532.1: 635749-635807 [-] Ensembl
Mir-750 CAJQUW010014532.1: 637170-637232 [-] Ensembl
Seed GAGAUUC
Precursor
(pre-Mir +30nt flank)		 
AGAAAUGUAAUGAAUGCGACUUUCAUUGGAAGUGGAGAGAGUUGUAUCUCUUACAGAAAUUUAUGAUGAGAUUCAUCUCCUCCAACUGCCAUAGAAAGUAUGAUCGACCAUGAAAUUUC
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Structure
        10          20        30         40        50         
AGAAAUGUAAUGAAUGCG--      AU   A  -|    A   U  U     UUACAGAA 
                    ACUUUC  UGG AG UGGAG GAG UG AUCUC        \
                    UGAAAG  ACC UC ACCUC CUC AC UAGAG        A
CUUUAAAGUACCAGCUAGUA      AU   G  A^    -   U  U     UAGUAUUU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Pcr-Mir-1175-P13_5p*
mirBase accessionNone
Sequence 
0- AGUGGAGAGAGUUGUAUCUCUUA -23
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Mature sequence

Pcr-Mir-1175-P13_3p
mirBase accessionNone
Sequence 
36- UGAGAUUCAUCUCCUCCAACUGC -59
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