MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-192-o1

Family name MIR-192 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID
Paralogues
Orthologues Ebu-Mir-192-o1  Laf-Mir-192-P1 
Node of Origin (locus) Cyclostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046074.1: 5108757-5108818 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-o1)		 Mir-194-o1 NC_046074.1: 5107960-5108016 [+] UCSC Ensembl
Mir-192-o1 NC_046074.1: 5108757-5108818 [+] UCSC Ensembl
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)		 
GCAAGUCACCCAAGGCUUCGAGGCCGGGCCUUGACCUAUGAAUUGACAGCCGGUGGCCACCGCAUCUCGCCUGUCAGUUUCACAGGUCAAGCCACGGCCUCCGACCAUUUCCUCGGCCGACC
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Structure
        10          20         30        40         50          
GCAAGUCACCCAAGGCU-  -       -|  C       A    -       C  GUGGCCA 
                  UC GAGGCCG GGC UUGACCU UGAA UUGACAG CG       \
                  AG CUCCGGC CCG AACUGGA ACUU GACUGUC GC       C
CCAGCCGGCUCCUUUACC  C       A^  -       C    U       C  UCUACGC 
120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-192-o1_5p
mirBase accessionNone
Sequence 
0- UUGACCUAUGAAUUGACAGCCG -22
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Star sequence

Pma-Mir-192-o1_3p*
mirBase accessionNone
Sequence 
39- CCUGUCAGUUUCACAGGUCAAGC -62
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