MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-676

Family name MIR-676 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-676
Paralogues
Orthologues Cfa-Mir-676  Cja-Mir-676  Cpo-Mir-676  Dno-Mir-676  Eca-Mir-676  Hsa-Mir-676  Laf-Mir-676  Mml-Mir-676  Mmr-Mir-676  Mmu-Mir-676  Ocu-Mir-676  Pab-Mir-676 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 70207033-70207089 [+] UCSC Ensembl
Seed CGUCCUG
Precursor
(pre-Mir +30nt flank)		 
UUUGUGUCAUGGCUUCACCUGAAUGCAUGACUCUGCAACCUUAGGACUUGCAGAAUUAACAGAAUGCCGUCCUGAGCUUGUCGAGCUAUGCGUUUCUGGGCAUUUCAUCUCUACAGA
Get precursor sequence
Structure
        10         20         30        40        50        
UUUGUGUCAUGGCUUCA-  U-|        A   U    C        UU   GAAUU 
                  CC  GAAUGCAUG CUC GCAA CUUAGGAC  GCA     A
                  GG  UUUGCGUAU GAG UGUU GAGUCCUG  CGU     A
AGACAUCUCUACUUUACG  UC^        C   C    C        C-   AAGAC 
     110       100        90        80        70         60
Deep sequencing
Go to detailed chart
CommentThe Drosha cut is +1 relative to most other mammals.
3' NTU Yes
MotifsNo
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-676_5p*
mirBase accessionNone
Sequence 
0- CUCUGCAACCUUAGGACUUGCA -22
Get sequence
Mature sequence

Rno-Mir-676_3p
mirBase accessionMIMAT0037264
Sequence 
36- CCGUCCUGAGCUUGUCGAGCU -57
Get sequence
Proposed targets TargetScanVert: rno-miR-676
miRDB: MIMAT0037264