MirGeneDB 3.0
MirGeneDB ID

Snu-Mir-29-P2q

Family name MIR-29 (all species)
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues Snu-Mir-29-P1  Snu-Mir-29-P2r 
Orthologues Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dpu-Mir-29-P2  Eba-Mir-29-P2  Esc-Mir-29-P2  Gsp-Mir-29  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) S. nudus
Node of Origin (family) Bilateria
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)		 CM049306.1: 39455813-39455871 [+]
Clustered miRNAs
(< 50kb from Mir-29-P2q)		 Mir-29-P1 CM049306.1: 39450605-39450663 [+]
Mir-29-P2q CM049306.1: 39455813-39455871 [+]
Seed AGCACCA
Precursor
(pre-Mir +30nt flank)		 
ACGACAGCGCAAACAAUUCCUCCCUCGGAUCCUGCUUUCAUUUGGUGCGUAGAGUUAAGUUGUAUUCUAGCACCAUUUGAAAUCAGUUUUCUAGGCCAGGGCCAGGUGCACUCAUAUAC
Get precursor sequence
Structure
        10         20         30        40        50         
ACGACAGCGCAAACAAU-    C-|  C   UC   C     UU      G    GUUAA 
                  UCCU  CCU GGA  CUG UUUCA  UGGUGC UAGA     G
                  GGGA  GGA CUU  GAC AAAGU  ACCACG AUCU     U
CAUAUACUCACGUGGACC    CC^  U   UU   U     UU      -    UAUGU 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Snu-Mir-29-P2q_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUGCUUUCAUUUGGUGCGUAGA -23
Get sequence
Mature sequence

Snu-Mir-29-P2q_3p
mirBase accessionNone
Sequence 
37- UAGCACCAUUUGAAAUCAGUUU -59
Get sequence