| MirGeneDB ID | Spt-Mir-430-P3 |
|---|---|
| Family name | MIR-430 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-430-P1 Spt-Mir-430-P2 Spt-Mir-430-P4 |
| Orthologues | Aca-Mir-430-P3 Ami-Mir-430-P3 Bta-Mir-430-P3 Cfa-Mir-430-P3 Cja-Mir-430-P3 Cli-Mir-430-P3 Cmi-Mir-430-P3 Cpi-Mir-430-P3 Cpo-Mir-430-P3 Dno-Mir-430-P3 Dre-Mir-430-o3a1 Dre-Mir-430-o3a2 Dre-Mir-430-o3a3 Dre-Mir-430-o3a4 Dre-Mir-430-o3a5 Dre-Mir-430-o3a6 Dre-Mir-430-o3a7 Dre-Mir-430-o3a8 Dre-Mir-430-o3a9 Dre-Mir-430-o3a10 Dre-Mir-430-o3a11 Dre-Mir-430-o3a12 Dre-Mir-430-o3a13 Dre-Mir-430-o3a14 Dre-Mir-430-o3a15 Dre-Mir-430-o3a16 Dre-Mir-430-o3b1 Dre-Mir-430-o3b2 Eca-Mir-430-P3 Ete-Mir-430-P3 Gga-Mir-430-P3 Gja-Mir-430-P3 Hsa-Mir-430-P3 Laf-Mir-430-P3 Mdo-Mir-430-P3 Mml-Mir-430-P3 Mmr-Mir-430-P3 Mmu-Mir-430-P3 Neu-Mir-430-P3 Oan-Mir-430-P3 Ocu-Mir-430-P3 Pab-Mir-430-P3 Rno-Mir-430-P3 Sha-Mir-430-P3 Sto-Mir-430-P3 Tgu-Mir-430-P3 Xla-Mir-430-P3a Xla-Mir-430-P3b Xtr-Mir-430-P3 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01012655.1: 3307625-3307688 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-430-P3) |
Mir-430-P1
QEPC01012655.1: 3307136-3307196 [+]
UCSC
Ensembl
Mir-430-P2 QEPC01012655.1: 3307379-3307436 [+] UCSC Ensembl Mir-430-P3 QEPC01012655.1: 3307625-3307688 [+] UCSC Ensembl Mir-430-P4 QEPC01012655.1: 3307778-3307837 [+] UCSC Ensembl Mir-92-P2a QEPC01012655.1: 3308100-3308159 [+] UCSC Ensembl |
| Seed | GAGUGCU |
| Precursor (pre-Mir +30nt flank) |
UUUACAGUCUCAGCUUAAGGGACCCCCACUACUUUAAUGUGGAAGUACUCACUUUGUUCCUAAAAAAAAGGUGAGUGCUUCCAUGUUUUAGUGAUGGUGAAUCCUAUGUUAUCAACCAGAGAAUGet precursor sequence |
| Structure | 10 20 30 40 50 60 UUUACAGUCUCAGCUUAA- CCC-| C UU UUGUUCC GGGA CCA UACU AAUGUGGAAGUACUCACU U UCCU GGU GUGA UUGUACCUUCGUGAGUGG A UAAGAGACCAACUAUUGUA AAGU^ A UU AAAAAAA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Spt-Mir-430-P3_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUUUAAUGUGGAAGUACUCACU -23
Get sequence
|
| Mature sequence | Spt-Mir-430-P3_3p (predicted) |
| mirBase accession | None |
| Sequence |
41- UGAGUGCUUCCAUGUUUUAGUGA -64
Get sequence
|
