| MirGeneDB ID | Spt-Mir-727 |
|---|---|
| Family name | MIR-727 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-727-v1 Cpi-Mir-727-v1 Dre-Mir-727-P1-v1 Gmo-Mir-727-P1 Gmo-Mir-727-P2 Loc-Mir-727-P3-v1 Loc-Mir-727-P4-v1 Mal-Mir-727-P2-v1 Tni-Mir-727-P1-v1 Tni-Mir-727-P2-v1 |
| Node of Origin (locus) | Osteichthyes |
| Node of Origin (family) | Osteichthyes |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01012997.1: 15691-15756 [-] UCSC Ensembl |
| Seed | CAGUCUU |
| Precursor (pre-Mir +30nt flank) |
AGUGGAAUUUGAUUGCCCUUUAUGUCAUUUUCAGUCUUCAAUUCCUCCCAGCCCGUUAAAUGGAAAGUGUGAGUUGAGGCGAGUUGAAGACUAAAAAUGCUGUGCAGAUUCAAGGUUACAUUCCCAGet precursor sequence |
| Structure | 10 20 30 40 50 60 AGUGGAAUUUGAUUGCC--| U U C CU - CCGUUAAAU CU UAUG CAUUUU AGUCUUCAAUUC CC CAGC G GA GUGU GUAAAA UCAGAAGUUGAG GG GUUG G ACCCUUACAUUGGAACUUA^ C C A C- A AGUGUGAAA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Spt-Mir-727_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCAGUCUUCAAUUCCUCCCAGC -22
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|
| Star sequence | Spt-Mir-727_3p* (predicted) |
| mirBase accession | None |
| Sequence |
44- UGAGGCGAGUUGAAGACUAAAA -66
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|
