MirGeneDB 3.0
MirGeneDB ID

War-Mir-2-o98

Family name MIR-2 (all species)
Species Wirenia (Solenogaster) (Wirenia argentea)
MiRBase ID
Paralogues War-Mir-2-o93  War-Mir-2-o94  War-Mir-2-o95  War-Mir-2-o96  War-Mir-2-o97  War-Mir-2-o99  War-Mir-2-P12 
Orthologues Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) W. argentea
Node of Origin (family) Protostomia
Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia)		 WNLI01082317.1: 1602-1658 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o98)		 Mir-2-o98 WNLI01082317.1: 1602-1658 [+] Ensembl
Mir-2-o99 WNLI01082317.1: 2162-2221 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
AGAAGUCAUGUGACCACUCAGUCAUGUGACCAUCAAGGUGGCUGUGAUGUGUUUUCCACCAAUCAUAUCACAGCCUGCUUUGAUGAGCAUAUGGCUGACAACGCAUCUCUUUUGACA
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Structure
        10          20        30         40        50       
AGAAGUCAUGUGACCAC--           AC         -|           UUUUC 
                   UCAGUCAUGUG  CAUCAAGGU GGCUGUGAUGUG     C
                   AGUCGGUAUAC  GUAGUUUCG CCGACACUAUAC     A
ACAGUUUUCUCUACGCAAC           GA         U^           UAACC 
     110       100        90        80        70        60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-2 genes were present in the last common ancestor of protostomes and how the multiple paralogues in lophotrochozoans relate to the four Mir-2 genes in arthropods. Thus all lophotrochozoan genes aside from Mir-2-P12 are classified as orphans pending further data and analysis.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

War-Mir-2-o98_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAUCAAGGUGGCUGUGAUGUG -21
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Mature sequence

War-Mir-2-o98_3p
mirBase accessionNone
Sequence 
35- UAUCACAGCCUGCUUUGAUGAG -57
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