Mir-750

MirGeneDB ID

Asu-Mir-750

Family name

MIR-750 (all species)

Species

Large roundworm (Ascaris suum)

MiRBase ID

asu-mir-750

Paralogues

Orthologues

Aae-Mir-750 Aga-Mir-750 Agr-Mir-750 Ava-Mir-750-P9 Ava-Mir-750-P10 Bge-Mir-750 Bko-Mir-750 Bpl-Mir-750 Csc-Mir-750-P7 Csc-Mir-750-P8 Cte-Mir-750 Dgr-Mir-750 Dlo-Mir-750 Dma-Mir-750 Dpu-Mir-750 Eba-Mir-750 Efe-Mir-750-P1 Efe-Mir-750-P2 Efe-Mir-750-P3 Esc-Mir-750 Hme-Mir-750 Hru-Mir-750 Isc-Mir-750 Lan-Mir-750 Lgi-Mir-750 Llo-Mir-750 Lpo-Mir-750-P4 Lpo-Mir-750-P5 Lpo-Mir-750-P6 Mgi-Mir-750 Mom-Mir-750 Npo-Mir-750 Obi-Mir-750 Ofu-Mir-750 Ovu-Mir-750 Pau-Mir-750 Pca-Mir-750 Pcr-Mir-750 Pdu-Mir-750 Pve-Mir-750 Rph-Mir-750 Sma-Mir-750 Sme-Mir-750 Snu-Mir-750 Tca-Mir-750 Tur-Mir-750 War-Mir-750

Node of Origin (locus)

Protostomia

Node of Origin (family)

Protostomia

Genome context
(ASU_PRJNA80881_plustraces)

Scaffold33: 575078-575140 [+]

Clustered miRNAs
(< 50kb from Mir-750)

Mir-750 Scaffold33: 575078-575140 [+]
Mir-1175 Scaffold33: 575559-575621 [+]

Seed

CAGAUCU

Precursor
(pre-Mir +30nt flank)

AGCAACAAUUUCAGUGGUCGAGUUUAUGGCAGUUGGAGGUUAGAUCUCGGGCAGAGCAUAUUCGGUUAUGCCAGAUCUAUUACUUCCAACUGACAUCGACUCGUCCUCAUUUAUUCCUCCUAC

Get precursor sequence

Structure

        10          20        30        40          50        60 
AGCAACAAUUUCAGUGGU--      U   G           --|      CG    GAGCAUA 
                    CGAGUU AUG CAGUUGGAGGU  UAGAUCU  GGCA       \
                    GCUCAG UAC GUCAACCUUCA  AUCUAGA  CCGU       U
CAUCCUCCUUAUUUACUCCU      C   A           UU^      --    AUUGGCU 
 120       110       100        90        80          70