MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-2-o140a

Family name MIR-2 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-2-o139a  Ava-Mir-2-o139b-v1  Ava-Mir-2-o140b  Ava-Mir-2-o141a  Ava-Mir-2-o141b 
Orthologues Gsp-Mir-2  Pca-Mir-2-o140  Ple-Mir-2 
Node of Origin (locus) A. vaga
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075496.1: 4518750-4518810 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o140a)		 Mir-2-o140a CP075496.1: 4518750-4518810 [+] Ensembl
Mir-2-o141a CP075496.1: 4518982-4519044 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
CUUCAUUUUAUUUAAUCAUCUCAAUUUGUGUCAGCAAAGAGAUCGUGCUAUGUGAAAAUCGAAAUCAUAUCACAGUCUUGCUUUGUUGACAUGAAACCAACAUACAUCAAAUAUGAUCAAG
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Structure
        10        20          30          40        50         
CUUCAUUUUAUUUAAUCAUCUCAA--  UG           --|   C   C    UGAAAA 
                          UU  UGUCAGCAAAG  AGAU GUG UAUG      \
                          AA  ACAGUUGUUUC  UCUG CAC AUAC      U
GAACUAGUAUAAACUACAUACAACCA  GU           GU^   A   U    UAAAGC 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
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Star sequence

Ava-Mir-2-o140a_5p*
mirBase accessionNone
Sequence 
0- UCAGCAAAGAGAUCGUGCUAUG -22
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Mature sequence

Ava-Mir-2-o140a_3p
mirBase accessionNone
Sequence 
37- UAUCACAGUCUUGCUUUGUUGACA -61
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