MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-2-o141b

Family name MIR-2 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-2-o139a  Ava-Mir-2-o139b-v1  Ava-Mir-2-o140a  Ava-Mir-2-o140b  Ava-Mir-2-o141a 
Orthologues Gsp-Mir-2  Pca-Mir-2-o141  Ple-Mir-2 
Node of Origin (locus) A. vaga
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075493.1: 8116222-8116283 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-o141b)		 Mir-2-o140b CP075493.1: 8116038-8116099 [+] Ensembl
Mir-2-o141b CP075493.1: 8116222-8116283 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
UAAAUUUCGAUUAAACAUGGCGAUUCCUAUCAGUACACAGUCUGUGAAAUGUUGUGAUAAAAUCAAAGUCAUAUCACAGCCUGCUUGCUGAUGUACAUCGUCAAUACCUUCACAUCAUACUG
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Structure
        10          20        30        40        50        60
UAAAUUUCGAUUAAACA--|      UCC        CA   U      A   UUGUGAUA 
                   UGGCGAU   UAUCAGUA  CAG CUGUGA AUG        A
                   ACUGCUA   GUAGUCGU  GUC GACACU UAC        A
GUCAUACUACACUUCCAUA^      CAU        UC   C      A   UGAAACUA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Star sequence

Ava-Mir-2-o141b_5p*
mirBase accessionNone
Sequence 
0- CAGUACACAGUCUGUGAAAUG -21
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Mature sequence

Ava-Mir-2-o141b_3p
mirBase accessionNone
Sequence 
41- UAUCACAGCCUGCUUGCUGAU -62
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