MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-92-o5

Family name MIR-92 (all species)
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-92-o1  Bla-Mir-92-o2  Bla-Mir-92-o3  Bla-Mir-92-o4  Bla-Mir-92-o6  Bla-Mir-92-o7  Bla-Mir-92-o8 
Orthologues Asu-Mir-92  Bfl-Mir-92-o5  Cel-Mir-92  Dan-Mir-92-P5  Dme-Mir-92-P5  Dmo-Mir-92-P5  Dsi-Mir-92-P5  Dya-Mir-92-P5  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000062: 528964-529022 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-o5)		 Mir-92-o5 Sc0000062: 528964-529022 [+] Ensembl
Mir-92-o6 Sc0000062: 529343-529403 [+] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
AACAGGGCAUGUCAGGUAUAUGUGGCUGGUAGGCUGGGAUAAGUUGCAGUGCUCUAUCUGUAGCCAGUAUUGCACUUGUUCCGUCCUGUUGGCCAUGGCAACUUCCCCUGCAUUUGUAG
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Structure
        10        20          30        40        50         
AACAGGGCAUGUCAGGUAUAU--|     GG    C          U        CUAUC 
                       GUGGCU  UAGG UGGGAUAAGU GCAGUGCU     U
                       UACCGG  GUCC GCCUUGUUCA CGUUAUGA     G
GAUGUUUACGUCCCCUUCAACGG^     UU    U          -        CCGAU 
       110       100        90        80         70        60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending new data.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Bla-Mir-92-o5_5p*
mirBase accessionNone
Sequence 
0- AGGCUGGGAUAAGUUGCAGUGCU -23
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Mature sequence

Bla-Mir-92-o5_3p
mirBase accessionNone
Sequence 
37- UAUUGCACUUGUUCCGUCCUGU -59
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