| MirGeneDB ID | Bta-Mir-197 |
|---|
| Family name |
MIR-197 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-197
|
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| Paralogues |
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| Orthologues |
Cfa-Mir-197
Cja-Mir-197
Cpo-Mir-197
Dno-Mir-197
Eca-Mir-197
Hsa-Mir-197
Laf-Mir-197
Mml-Mir-197
Mmr-Mir-197
Ocu-Mir-197
Pab-Mir-197
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037330.1: 33850286-33850346 [-]
UCSC
Ensembl
|
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| Seed |
UCACCAC |
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Precursor
(pre-Mir +30nt flank) |
CUGCUGGAAUCUGUGCUCCGGGGGCUGUGCCGGGUAGAGAGGGCAGUGGGAGGUAAGAGCUCUUCACCCUUCACCACCUUCUCCACCCAGCAGGGCCAGCACACUUUGGUCUACGGCAUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUGCUGGAAUCUGUGCUCCGGG--| G C A CA GA UAAGAG
GGCU UGC GGGU GAGAGGG GUGG GG \
CCGG ACG CCCA CUCUUCC CACU CC C
UAUACGGCAUCUGGUUUCACACGA^ G A C AC UC ACUUCU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-197_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGGGUAGAGAGGGCAGUGGGAGG -23
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-197_3p |
| mirBase accession | MIMAT0009257 |
|---|
| Sequence |
39- UUCACCACCUUCUCCACCCAGC -61
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-197
|
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