| MirGeneDB ID | Bta-Mir-448 |
|---|
| Family name |
MIR-448 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-448
|
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| Paralogues |
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| Orthologues |
Cfa-Mir-448
Cja-Mir-448
Cpo-Mir-448
Eca-Mir-448
Ete-Mir-448
Hsa-Mir-448
Laf-Mir-448
Mml-Mir-448
Mmr-Mir-448
Mmu-Mir-448
Ocu-Mir-448
Pab-Mir-448
Rno-Mir-448
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 63159366-63159445 [+]
UCSC
Ensembl
|
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| Seed |
UGCAUAU |
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Precursor
(pre-Mir +30nt flank) |
GUAGCUAACCUUCACAUGGGCGGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCUAUUUUAUACUAAGGGGGGGUUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCCACCCACAUCAUCAGGACAUAUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60 70
GUAGCUAACCUUCACAU-| C UGA G U AGGAAAUCCCUAUUUUA
GGG GGGGAGGU ACAUCCUGCAUA UGC GCC U
CCC CCCCUCUA UGUAGGAUGUAU ACG UGG A
AUAUACAGGACUACUACA^ A CCC - U UCGGUUGGGGGGGAAUC
. 130 120 110 100 90 80 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-448_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GAACAUCCUGCAUAGUGCUGCC -22
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-448_3p |
| mirBase accession | MIMAT0009319 |
|---|
| Sequence |
60- UUGCAUAUGUAGGAUGUCCC -80
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-448
|
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