MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-1271

Family name MIR-1271 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-1271
Paralogues
Orthologues Bta-Mir-1271  Cpo-Mir-1271  Dno-Mir-1271  Eca-Mir-1271  Ete-Mir-1271  Hsa-Mir-1271  Laf-Mir-1271  Mml-Mir-1271  Mmu-Mir-1271  Pab-Mir-1271  Rno-Mir-1271 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr4: 36951021-36951078 [-] UCSC Ensembl
Seed UUGGCAC
Precursor
(pre-Mir +30nt flank)		 
ACCUCUGUAUCCCCAGCACCCAGAUCAGUGCUUGGCACCUAGUAAGCACUCAGUAAAUACUUGUUGAGUGCCUGCUAUGUGCCAGGCAUUGUGCUGAGGGCUUUGGGGGGAUCCAGAU
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Structure
        10         20         30        40        50        
ACCUCUGUAUCCCCAGCA-  -|  AU             C     A       GUAAA 
                   CC CAG  CAGUGCUUGGCAC UAGUA GCACUCA     U
                   GG GUC  GUUACGGACCGUG AUCGU CGUGAGU     A
UAGACCUAGGGGGGUUUCG  A^  GU             U     C       UGUUC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-1271_5p
mirBase accessionMIMAT0006685
Sequence 
0- CUUGGCACCUAGUAAGCACUCA -22
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Proposed targets TargetScanVert: cfa-miR-1271
miRDB: MIMAT0006685
Star sequence

Cfa-Mir-1271_3p*
mirBase accessionNone
Sequence 
36- AGUGCCUGCUAUGUGCCAGGCA -58
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