MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-1271

Family name MIR-1271 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-1271
Paralogues
Orthologues Bta-Mir-1271  Cfa-Mir-1271  Dno-Mir-1271  Eca-Mir-1271  Ete-Mir-1271  Hsa-Mir-1271  Laf-Mir-1271  Mml-Mir-1271  Mmu-Mir-1271  Pab-Mir-1271  Rno-Mir-1271 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_17: 22117662-22117719 [+] UCSC
Seed UUGGCAC
Precursor
(pre-Mir +30nt flank)		 
ACCUCUGUAUCCCCAGCACCCAGAUCAGUGCUUGGCACCUAGUAAGCACUCAGUAAAUACUUGAUGAGUGCCUGCUAUGUGCCAGGCAUUGUGCUGGGGCUUUGGGGGGAUUCAGAGG
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Structure
        10          20        30        40        50        
ACCUCUGUAUCCCCAGCA--|    AU             C     A       GUAAA 
                    CCCAG  CAGUGCUUGGCAC UAGUA GCACUCA     U
                    GGGUC  GUUACGGACCGUG AUCGU CGUGAGU     A
GGAGACUUAGGGGGGUUUCG^    GU             U     C       AGUUC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-1271_5p
mirBase accessionMIMAT0047411
Sequence 
0- CUUGGCACCUAGUAAGCACUCA -22
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Star sequence

Cpo-Mir-1271_3p*
mirBase accessionMIMAT0047412
Sequence 
36- AGUGCCUGCUAUGUGCCAGGCA -58
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