| MirGeneDB ID | Cmi-Mir-1329 |
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| Family name |
MIR-1329 (all species) |
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| Species |
Australian ghostshark (Callorhinchus milii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aca-Mir-1329-v1
Ami-Mir-1329
Bta-Mir-1329
Cli-Mir-1329-v1
Cpi-Mir-1329-v1
Ebu-Mir-1329
Eca-Mir-1329
Gga-Mir-1329-v1
Gja-Mir-1329-v1
Laf-Mir-1329
Mdo-Mir-1329
Mmr-Mir-1329
Mun-Mir-1329
Neu-Mir-1329
Oan-Mir-1329-v1
Pbv-Mir-1329
Pma-Mir-1329
Sha-Mir-1329
Spt-Mir-1329
Sto-Mir-1329
Tgu-Mir-1329-v1
Xla-Mir-1329-P1
Xla-Mir-1329-P2
Xtr-Mir-1329
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| Node of Origin (locus) |
Vertebrata
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI635905.1: 4552076-4552135 [-]
UCSC
Ensembl
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| Seed |
ACAGUGA |
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Precursor
(pre-Mir +30nt flank) |
UUUUUCACAGCAACAGUCUGGACAUAUGGAUACAGUGAUCAGGUUACGAUGGAUUGAAAAGUAAGAACCACAUAGCUUGGUCACGAUGUCCAUUUGACCAGAAAAUCUUCAACCUUCAGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUUUUCACAGCAACAGU--| A U CA CGA AUUGAAA
CUGG CA AUGGAUA GUGAUCAGGUUA UGG \
GACC GU UACCUGU CACUGGUUCGAU ACC A
AGACUUCCAACUUCUAAAA^ A U AG AC- AAGAAUG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bl |
Br |
Ey |
Gi |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Re |
Sk |
Sp |
Te |
Ut |
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| Mature sequence |
Cmi-Mir-1329_5p |
| mirBase accession | None |
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| Sequence |
0- UACAGUGAUCAGGUUACGAUGGA -23
Get sequence
|
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| Star sequence |
Cmi-Mir-1329_3p* |
| mirBase accession | None |
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| Sequence |
38- CACAUAGCUUGGUCACGAUGUC -60
Get sequence
|
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