| MirGeneDB ID | Spt-Mir-1329 |
|---|---|
| Family name | MIR-1329 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-1329-v1 Ami-Mir-1329 Bta-Mir-1329 Cli-Mir-1329-v1 Cmi-Mir-1329 Cpi-Mir-1329-v1 Ebu-Mir-1329 Eca-Mir-1329 Gga-Mir-1329-v1 Gja-Mir-1329-v1 Laf-Mir-1329 Mdo-Mir-1329 Mmr-Mir-1329 Mun-Mir-1329 Neu-Mir-1329 Oan-Mir-1329-v1 Pbv-Mir-1329 Pma-Mir-1329 Sha-Mir-1329 Sto-Mir-1329 Tgu-Mir-1329-v1 Xla-Mir-1329-P1 Xla-Mir-1329-P2 Xtr-Mir-1329 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01008233.1: 6276173-6276233 [+] UCSC Ensembl |
| Seed | ACAGUGA |
| Precursor (pre-Mir +30nt flank) |
UAGAGAUGAACCUGCGUCUGGCUGUAGGGGUACAGUGAUCAGGUUACGACGGAUUUCUCUAGUAACAACCUCGUAGCUUGAUCACGAUAUCCCUAUGACUCAGAUAACAACAAGUGUGACCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UAGAGAUGAACCUGCGU- -|CU CA C AUUUCUC CUG G GUAGGGGUA GUGAUCAGGUUACGA GG U GAC C UAUCCCUAU CACUAGUUCGAUGCU CC A CCAGUGUGAACAACAAUA U^AG AG - AACAAUG . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Spt-Mir-1329_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UACAGUGAUCAGGUUACGACGGA -23
Get sequence
|
| Star sequence | Spt-Mir-1329_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- CCUCGUAGCUUGAUCACGAUAUC -61
Get sequence
|
