MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-92-P2b

Family name MIR-92 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-92-P1a  Cmi-Mir-92-P1b  Cmi-Mir-92-P1c  Cmi-Mir-92-P1d  Cmi-Mir-92-P2a  Cmi-Mir-92-P2c  Cmi-Mir-92-P2d 
Orthologues Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Sto-Mir-92-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635855.1: 9359771-9359830 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P2b)		 Mir-17-P1b KI635855.1: 9354316-9354375 [+] UCSC Ensembl
Mir-17-P3b KI635855.1: 9356646-9356708 [+] UCSC Ensembl
Mir-17-P4b KI635855.1: 9358118-9358178 [+] UCSC Ensembl
Mir-19-P2b KI635855.1: 9358429-9358492 [+] UCSC Ensembl
Mir-92-P1b KI635855.1: 9359483-9359541 [+] UCSC Ensembl
Mir-92-P2b KI635855.1: 9359771-9359830 [+] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
CCAGGAAGCUCAAGACUAGCCAGUGUUGAGAGGCGGAGACUGGAGCAAUUGCUGGGUUUCCCGUGAAGCAUUGCACUUGUCUCGGUCCGACAGUGCUGGUACAACACUACCACUCGGUAA
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Structure
        10          20        30        40        50          
CCAGGAAGCUCAAGACUA--|    UG   AGA   G     U  A     U   GGGUUU 
                    GCCAG  UUG   GGC GAGAC GG GCAAU GCU      \
                    UGGUC  GAC   CUG CUCUG UC CGUUA CGA      C
AAUGGCUCACCAUCACAACA^    GU   AGC   G     U  A     -   AGUGCC 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-92-P2b_5p*
mirBase accessionNone
Sequence 
0- AGGCGGAGACUGGAGCAAUUGCU -23
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Mature sequence

Cmi-Mir-92-P2b_3p
mirBase accessionNone
Sequence 
38- CAUUGCACUUGUCUCGGUCCGA -60
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