MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-19-P2b

Family name MIR-19 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-19-P1a-v1  Cmi-Mir-19-P1c  Cmi-Mir-19-P2a  Cmi-Mir-19-P2c  Cmi-Mir-19-P2d 
Orthologues Sto-Mir-19-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635855.1: 9358429-9358492 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-19-P2b)		 Mir-17-P1b KI635855.1: 9354316-9354375 [+] UCSC Ensembl
Mir-17-P3b KI635855.1: 9356646-9356708 [+] UCSC Ensembl
Mir-17-P4b KI635855.1: 9358118-9358178 [+] UCSC Ensembl
Mir-19-P2b KI635855.1: 9358429-9358492 [+] UCSC Ensembl
Mir-92-P1b KI635855.1: 9359483-9359541 [+] UCSC Ensembl
Mir-92-P2b KI635855.1: 9359771-9359830 [+] UCSC Ensembl
Seed GUGCAAA
Precursor
(pre-Mir +30nt flank)		 
GUGAGAGGCAGGUGUAAGCUGACUCUGGUUAGUUUUGCUGGCUUUGCAGUCAGUUGCGUGAUGCUCAGUACUGUGCAAAUCCACGCAAAACUGACUGCGGCAGUGAUUGCAGCACAAGGUGAGG
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Structure
        10           20        30         40        50        60  
GUGAGAGGCAGGUGUAA---|   A  C             -   C      GU    UGCGUGA 
                    GCUG CU UGGUUAGUUUUGC UGG UUUGCA  CAGU       \
                    UGAC GG GUCAGUCAAAACG ACC AAACGU  GUCA       U
GGAGUGGAACACGACGUUAG^   -  C             C   U      --    UGACUCG 
  120       110        100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-19-P2b_5p*
mirBase accessionNone
Sequence 
0- AGUUUUGCUGGCUUUGCAGUCAGU -24
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Mature sequence

Cmi-Mir-19-P2b_3p
mirBase accessionNone
Sequence 
41- UGUGCAAAUCCACGCAAAACUGA -64
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