MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-19-P2d

Family name MIR-19 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-19-P1a-v1  Cmi-Mir-19-P1c  Cmi-Mir-19-P2a  Cmi-Mir-19-P2b  Cmi-Mir-19-P2c 
Orthologues Dre-Mir-19-P2d  Gmo-Mir-19-P2d  Lch-Mir-19-P2d  Loc-Mir-19-P2d  Mal-Mir-19-P2d  Mun-Mir-19-P2d  Tni-Mir-19-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI637757.1: 1827-1885 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-19-P2d)		 Mir-19-P2d KI637757.1: 1827-1885 [+] UCSC Ensembl
Mir-92-P2d KI637757.1: 5709-5768 [+] UCSC Ensembl
Seed GUGCAAA
Precursor
(pre-Mir +30nt flank)		 
GGUUGGCAUGGCUUGCACCGGGCUCCAGUCAGCUUUGCUGGGUUGCAGCCAGCCUGUCCGACACGCUGUGCAAACCCACGCAGAACUGACUGUGGCUGAGGAGCAUCAGCACAGACUGC
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Structure
        10         20         30         40           50       
GGUUGGCAUGGCUUGCA-  G-   UC       C     -      ---|    CAGCCUG 
                  CC  GGC  CAGUCAG UUUGC UGGGUU   GCAGC       \
                  GG  UCG  GUCAGUC AGACG ACCCAA   UGUCG       U
CGUCAGACACGACUACGA  AG   GU       A     C      ACG^    CACAGCC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-19-P2d_5p*
mirBase accessionNone
Sequence 
0- AGCUUUGCUGGGUUGCAGCCA -21
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Mature sequence

Cmi-Mir-19-P2d_3p
mirBase accessionNone
Sequence 
36- UGUGCAAACCCACGCAGAACUGA -59
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