MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-1249

Family name MIR-1249 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1249  Cfa-Mir-1249  Cja-Mir-1249  Dno-Mir-1249  Eca-Mir-1249  Ete-Mir-1249  Hsa-Mir-1249  Laf-Mir-1249  Mml-Mir-1249  Mmr-Mir-1249  Mmu-Mir-1249  Ocu-Mir-1249  Pab-Mir-1249  Rno-Mir-1249 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_216: 444858-444915 [+] UCSC
Seed ACGCCCU
Precursor
(pre-Mir +30nt flank)		 
CUUGCAGUUCCGAUUCUUGUUUGCAUGGGGAGGAGGGAGGAGAUGGGCCAAGUUCCCUCUGCCUGGAACGCCCUCCCCCCCUUCUUCACCUGGCGAACUCCUACUCAUCCUUCAAGAC
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Structure
        10          20         30        40        50        60
CUUGCAGUUCCGAUUCUU--      AU  -|        A  A  U    CAA     CUC 
                    GUUUGC  GG GGAGGAGGG GG GA GGGC   GUUCC   U
                    CAAGCG  CC CUUCUUCCC CC CU CCCG   CAAGG   G
CAGAACUUCCUACUCAUCCU      GU  A^        -  C  -    ---     UCC 
      110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-1249_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGAGGGAGGAGAUGGGCCAAGUUCC -26
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Mature sequence

Cpo-Mir-1249_3p (predicted)
mirBase accessionNone
Sequence 
36- AACGCCCUCCCCCCCUUCUUCA -58
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