| MirGeneDB ID | Mml-Mir-1249 |
|---|
| Family name |
MIR-1249 (all species) |
|---|
| Species |
Rhesus monkey (Macaca mulatta) |
|---|
| MiRBase ID |
mml-mir-1249
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-1249
Cfa-Mir-1249
Cja-Mir-1249
Cpo-Mir-1249
Dno-Mir-1249
Eca-Mir-1249
Ete-Mir-1249
Hsa-Mir-1249
Laf-Mir-1249
Mmr-Mir-1249
Mmu-Mir-1249
Ocu-Mir-1249
Pab-Mir-1249
Rno-Mir-1249
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014345.1: 6310948-6311006 [+]
UCSC
Ensembl
|
|---|
| Seed |
CGCCCUU |
|---|
Precursor
(pre-Mir +30nt flank) |
CCUGCUCCUCAGAUUCUUGUUGGCAUGGGGAGGAGGGAGGAGAUGGGCCAAGUUCCCUCUGGCUGGAACGCCCUUCCCCCCCUUCUUCACCUGGCGAACUCCUACUCGUCCUUCAAGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCUGCUCCUCAGAUUCUU-- G AU -| A A U CAA CCUC
GUU GC GG GGAGGAGGG GG GA GGGC GUUC U
CAA CG CC CUUCUUCCC CC CU CCCG CAAG G
CAGAACUUCCUGCUCAUCCU G GU A^ - C U --- GUCG
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Mml-Mir-1249_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGAGGGAGGAGAUGGGCCAAGUUC -25
Get sequence
|
|---|
| Mature sequence |
Mml-Mir-1249_3p |
| mirBase accession | MIMAT0024324 |
|---|
| Sequence |
37- ACGCCCUUCCCCCCCUUCUUCA -59
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-1249
|
|---|
