| MirGeneDB ID | Dno-Mir-328 |
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| Family name |
MIR-328 (all species) |
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| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
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| MiRBase ID |
dno-mir-328
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-328
Cfa-Mir-328
Cja-Mir-328
Cpo-Mir-328
Eca-Mir-328
Ete-Mir-328
Hsa-Mir-328
Laf-Mir-328
Mml-Mir-328
Mmr-Mir-328
Mmu-Mir-328
Ocu-Mir-328
Pab-Mir-328
Rno-Mir-328
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(dasNov3) |
JH568388: 312189-312248 [+]
UCSC
Ensembl
|
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| Seed |
UGGCCCU |
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Precursor
(pre-Mir +30nt flank) |
AAGUCCUGGGCAGUCUCGGAGCCUGGAGCGGGGGGGCAGGAGGGGCUCAGGGAGAAGUGUGUGCAGCCCCUGGCCCUCUCUGCCCUUCCGCCCCCUGUUCCCGGACCCGCCACGCCCAGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAGUCCUGGGCAGUCUC--| CU A GA U AGAAGUG
GGAGC GG GCGGGGGGGCAG GGGGC CAGGG \
CCUUG CC CGCCUUCCCGUC UCCCG GUCCC U
GGACCCGCACCGCCCAGGC^ UC C UC - CGACGUG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There are also a significant number of 3p reads that are mono-adenylated at the 3' end. |
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dno-Mir-328_5p* |
| mirBase accession | MIMAT0047807 |
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| Sequence |
0- GGGGGGCAGGAGGGGCUCAGGG -22
Get sequence
|
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| Mature sequence |
Dno-Mir-328_3p |
| mirBase accession | MIMAT0047808 |
|---|
| Sequence |
39- CUGGCCCUCUCUGCCCUUCCG -60
Get sequence
|
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