MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-328

Family name MIR-328 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-328a
Paralogues
Orthologues Bta-Mir-328  Cfa-Mir-328  Cja-Mir-328  Cpo-Mir-328  Dno-Mir-328  Eca-Mir-328  Ete-Mir-328  Hsa-Mir-328  Laf-Mir-328  Mml-Mir-328  Mmr-Mir-328  Mmu-Mir-328  Ocu-Mir-328  Pab-Mir-328 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr19: 37263215-37263275 [-] UCSC Ensembl
Seed UGGCCCU
Precursor
(pre-Mir +30nt flank)		 
AAGUCCUGGGCGGUCUCGGAGCCUGGGGCAGGGGGGCAGGAGGGGCUCAGGGAGAAAGCAUCUACAGCCCCUGGCCCUCUCUGCCCUUCCGUCCCCUGUCCCCAAAUACACCAGAUCCAGC
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Structure
        10          20        30        40        50        60
AAGUCCUGGGCGGUCUC--| AG CU     A         GA     U     AGAAAGC 
                   GG  C  GGGGC GGGGGGCAG  GGGGC CAGGG       A
                   CC  G  CCCUG CUUCCCGUC  UCCCG GUCCC       U
CGACCUAGACCACAUAAAC^ CU UC     C         UC     -     CGACAUC 
 .       110       100        90        80         70
Deep sequencing
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CommentAlthough there is a templated T at the 3' end of the 3p arm, the post-transcriptional addition of a terminal 3' U is supported by the 3' offset reads in cow in addition to the 3p reads in armadillo where the T is not templated.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-328_5p*
mirBase accessionMIMAT0017029
Sequence 
0- GGGGGGCAGGAGGGGCUCAGGG -22
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Proposed targets TargetScanVert: rno-miR-328a-5p
miRDB: MIMAT0017029
Mature sequence

Rno-Mir-328_3p
mirBase accessionMIMAT0000564
Sequence 
40- CUGGCCCUCUCUGCCCUUCCG -61
Get sequence
Proposed targets microrna.org: MIMAT0000564
TargetScanVert: rno-miR-328a-3p
miRDB: MIMAT0000564