| MirGeneDB ID | Ete-Mir-328 |
|---|
| Family name |
MIR-328 (all species) |
|---|
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-328
Cfa-Mir-328
Cja-Mir-328
Cpo-Mir-328
Dno-Mir-328
Eca-Mir-328
Hsa-Mir-328
Laf-Mir-328
Mml-Mir-328
Mmr-Mir-328
Mmu-Mir-328
Ocu-Mir-328
Pab-Mir-328
Rno-Mir-328
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(echTel2) |
JH980312: 18343632-18343689 [+]
UCSC
|
|---|
| Seed |
UGGCCCU |
|---|
Precursor
(pre-Mir +30nt flank) |
GGGCCGUCUCGGAGCCUGAGGCGGAGGGCGGGGAGGCAGUAGGGGCUCAGGGGGAGUGUGUGCAGCCCUGGCCCUCUCUGCCCUUCCGCCCCCCGGCCCCGCCCCGCGCUACCGCUAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGCCGUCUCGGAGCCU- A -| A GA UA U GGAGUG
G GG CGG GGGCGGG GGCAG GGGGC CAGGG \
C CC GCC CCCGCCU CCGUC UCCCG GUCCC U
CAUCGCCAUCGCGCCCCG C G^ C UC UC - GACGUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ete-Mir-328_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGGAGGCAGUAGGGGCUCAGGG -22
Get sequence
|
|---|
| Mature sequence |
Ete-Mir-328_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- CUGGCCCUCUCUGCCCUUCCG -58
Get sequence
|
|---|
