MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-92-P1a2

Family name MIR-92 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-92a-2
Paralogues Dre-Mir-92-P1a1  Dre-Mir-92-P1d  Dre-Mir-92-P2c  Dre-Mir-92-P2d 
Orthologues Aca-Mir-92-P1a  Ami-Mir-92-P1a  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1a  Cel-Mir-92  Cfa-Mir-92-P1a  Cja-Mir-92-P1a  Cli-Mir-92-P1a  Cmi-Mir-92-P1a  Cpi-Mir-92-P1a  Cpo-Mir-92-P1a  Dno-Mir-92-P1a  Eca-Mir-92-P1a  Esc-Mir-92  Ete-Mir-92-P1a  Gga-Mir-92-P1a  Gja-Mir-92-P1a  Gmo-Mir-92-P1a2  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P1a  Isc-Mir-92  Laf-Mir-92-P1a  Lch-Mir-92-P1a  Loc-Mir-92-P1a  Mal-Mir-92-P1a2  Mdo-Mir-92-P1a  Mml-Mir-92-P1a  Mmr-Mir-92-P1a  Mmu-Mir-92-P1a  Mun-Mir-92-P1a  Obi-Mir-92  Ocu-Mir-92-P1a  Pab-Mir-92-P1a  Pbv-Mir-92-P1a  Rno-Mir-92-P1a  Sha-Mir-92-P1a  Sme-Mir-92  Spt-Mir-92-P1a  Sto-Mir-92-P1a  Tgu-Mir-92-P1a  Tni-Mir-92-P1a2  Xtr-Mir-92-P1a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(danRer11)		 chr9: 53436299-53436355 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P1a2)		 Mir-92-P1a2 chr9: 53436299-53436355 [-] UCSC Ensembl
Mir-19-P2a2 chr9: 53436416-53436475 [-] UCSC Ensembl
Mir-17-P4a2 chr9: 53436542-53436606 [-] UCSC Ensembl
Mir-19-P1a2 chr9: 53436701-53436758 [-] UCSC Ensembl
Mir-17-P2a2 chr9: 53436841-53436905 [-] UCSC Ensembl
Mir-17-P1a2 chr9: 53436955-53437013 [-] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
CCCGUCAGAUCACAGCAUCCCUUUCUUUGCAGGUUGGGAUCGGCCGCAAUGCUCUGUGCUGGAAGUAUUGCACUUGUCCCGGCCUGUGAAGAGCAUGGGAAAUUGUUCGGCUGCUUU
Get precursor sequence
Structure
        10        20          30        40        50        
CCCGUCAGAUCACAGCAU   U--|    UG           C  CC        CUGU 
                  CCC   UUCUU  CAGGUUGGGAU GG  GCAAUGCU    G
                  GGG   GAGAA  GUCCGGCCCUG UC  CGUUAUGA    C
UUUCGUCGGCUUGUUAAA   UAC^    GU           U  A-        AGGU 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-92-P1a2_5p*
mirBase accessionMIMAT0031954
Sequence 
0- AGGUUGGGAUCGGCCGCAAUGCU -23
Get sequence
Mature sequence

Dre-Mir-92-P1a2_3p
mirBase accessionMIMAT0001808
Sequence 
35- UAUUGCACUUGUCCCGGCCUGU -57
Get sequence
Proposed targets TargetScanFish: dre-miR-92a