| MirGeneDB ID | Lch-Mir-132-P2 |
|---|---|
| Family name | MIR-132 (all species) |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-132-P1 |
| Orthologues | Aca-Mir-132-P2 Ami-Mir-132-P2 Bta-Mir-132-P2 Cfa-Mir-132-P2 Cja-Mir-132-P2 Cmi-Mir-132-P2 Cpi-Mir-132-P2 Cpo-Mir-132-P2 Dno-Mir-132-P2 Dre-Mir-132-P2a Dre-Mir-132-P2b Eca-Mir-132-P2 Gga-Mir-132-P2 Gja-Mir-132-P2 Gmo-Mir-132-P2a Gmo-Mir-132-P2b Hsa-Mir-132-P2 Laf-Mir-132-P2 Loc-Mir-132-P2 Mal-Mir-132-P2a Mal-Mir-132-P2b Mdo-Mir-132-P2 Mml-Mir-132-P2 Mmr-Mir-132-P2 Mmu-Mir-132-P2 Mun-Mir-132-P2 Neu-Mir-132-P2 Oan-Mir-132-P2 Ocu-Mir-132-P2 Pab-Mir-132-P2 Pbv-Mir-132-P2 Pma-Mir-132-o2 Rno-Mir-132-P2 Sha-Mir-132-P2 Spt-Mir-132-P2 Tgu-Mir-132-P2 Tni-Mir-132-P2a Tni-Mir-132-P2b Xla-Mir-132-P2c Xla-Mir-132-P2d Xtr-Mir-132-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH128089.1: 379330-379397 [+] Ensembl |
| Clustered miRNAs (< 50kb from Mir-132-P2) |
Mir-132-P2
JH128089.1: 379330-379397 [+]
Ensembl
Mir-132-P1 JH128089.1: 385834-385892 [+] Ensembl Mir-2184 JH128089.1: 395160-395219 [-] Ensembl |
| Seed | CCUUGGC |
| Precursor (pre-Mir +30nt flank) |
CCGCCAUCGAAUAUCAGUCAGAGCGUCAACACCUUGGCUCUAGACUGCUUACUGCUAAAUGUUGUGAAAGAUACAGUAACAGUCUACAGUCAUGGCUACUGAAGCAUGACAACUUCUUCAGCUGGAAGGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCGCCAUCGAAUAUCAG--| GA G ACA- U C C GCUAAAUGUU UCA GC UCA CC UGGCU UAGACUG UUACU \ AGU CG AGU GG ACUGA AUCUGAC AAUGA G GAAGGUCGACUUCUUCAAC^ A- A CAUC U C - CAUAGAAAGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Lch-Mir-132-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- ACCUUGGCUCUAGACUGCUUACU -23
Get sequence
|
| Co-mature sequence | Lch-Mir-132-P2_3p (predicted) |
| mirBase accession | None |
| Sequence |
46- UAACAGUCUACAGUCAUGGCUA -68
Get sequence
|
