MirGeneDB 3.0
MirGeneDB ID

Lgi-Mir-1986

Family name MIR-1986 (all species)
Species Owl limpet (Lottia gigantea)
MiRBase ID lgi-mir-1986
Paralogues
Orthologues Agr-Mir-1986  Cte-Mir-1986  Eba-Mir-1986  Efe-Mir-1986  Hru-Mir-1986-P1  Hru-Mir-1986-P2  Lan-Mir-1986  Lhy-Mir-1986  Mgi-Mir-1986  Mom-Mir-1986  Npo-Mir-1986  Obi-Mir-1986  Ofu-Mir-1986  Ovu-Mir-1986  Pdu-Mir-1986  Pve-Mir-1986-P3  Pve-Mir-1986-P4  Pve-Mir-1986-P5  Rph-Mir-1986  War-Mir-1986 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(Lotgi1)		 LOTGIsca_39: 81755-81811 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1986)		 Mir-1986 LOTGIsca_39: 81755-81811 [-] Ensembl
Mir-1990-P2 LOTGIsca_39: 82025-82079 [-] Ensembl
Seed GGAUUUC
Precursor
(pre-Mir +30nt flank)		 
UUUCGAGAGAAUUUCACCGGCUAUUGUGGGCGCGGAUCGUGGGGGCACCACUCUUACUUUCACGGUGGAUUUCCCAAGAUCCGUGAUUGCAGUUCAGUUGGUAUCGACAGGCAGCUG
Get precursor sequence
Structure
        10        20          30        40        50        
UUUCGAGAGAAUUUCACC    --|   UG G        G      CA     CUUAC 
                  GGCU  AUUG  G CGCGGAUC UGGGGG  CCACU     \
                  UUGA  UGAC  U GUGCCUAG ACCCUU  GGUGG     U
GUCGACGGACAGCUAUGG    CU^   GU A        A      UA     CACUU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Lgi-Mir-1986_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGCGGAUCGUGGGGGCACCACU -22
Get sequence
Mature sequence

Lgi-Mir-1986_3p
mirBase accessionMIMAT0009728
Sequence 
35- UGGAUUUCCCAAGAUCCGUGAU -57
Get sequence