MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-27-P2b

Family name MIR-27 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-27-P1  Mal-Mir-27-P2a  Mal-Mir-27-P3  Mal-Mir-27-P4a  Mal-Mir-27-P4b 
Orthologues Aca-Mir-27-P2  Ami-Mir-27-P2  Bta-Mir-27-P2  Cfa-Mir-27-P2  Cja-Mir-27-P2  Cli-Mir-27-P2  Cmi-Mir-27-P2  Cpi-Mir-27-P2  Cpo-Mir-27-P2  Dno-Mir-27-P2  Dre-Mir-27-P2b  Eca-Mir-27-P2  Ete-Mir-27-P2  Gga-Mir-27-P2  Gja-Mir-27-P2  Gmo-Mir-27-P2b  Hsa-Mir-27-P2  Laf-Mir-27-P2  Lch-Mir-27-P2  Loc-Mir-27-P2  Mdo-Mir-27-P2  Mml-Mir-27-P2  Mmr-Mir-27-P2  Mmu-Mir-27-P2  Mun-Mir-27-P2  Neu-Mir-27-P2  Oan-Mir-27-P2  Ocu-Mir-27-P2  Pab-Mir-27-P2  Pbv-Mir-27-P2  Pma-Mir-27-o2  Rno-Mir-27-P2  Sha-Mir-27-P2  Spt-Mir-27-P2  Sto-Mir-27-P2  Tgu-Mir-27-P2  Tni-Mir-27-P2b  Xtr-Mir-27-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884708.1: 577864-577926 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-27-P2b)		 Mir-23-P2b KV884708.1: 577529-577586 [+] UCSC Ensembl
Mir-27-P2b KV884708.1: 577864-577926 [+] UCSC Ensembl
Seed UCACAGU
Precursor
(pre-Mir +30nt flank)		 
GGUUUGUGUGCCCUCUCUCCAGCUAGGCACAGAGCUUAGCUGAUUGGUGAACAGUGAUUGAUUUCCUCUUUGUUCACAGUGGCUAAGUUCUGCACCUGAGGAGAGCAUGACCCAGACAAGCAG
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Structure
        10            20        30        40        50        60  
GGUUUGUGUGCCCUCUC----|  AGC    CA             AUUG      AGUGAUUGA 
                     UCC   UAGG  CAGAGCUUAGCUG    GUGAAC         \
                     AGG   GUCC  GUCUUGAAUCGGU    CACUUG         U
GACGAACAGACCCAGUACGAG^  A--    AC             GA--      UUUCUCCUU 
 120       110       100          90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-27-P2b_5p*
mirBase accessionNone
Sequence 
0- AGAGCUUAGCUGAUUGGUGAAC -22
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Mature sequence

Mal-Mir-27-P2b_3p
mirBase accessionNone
Sequence 
42- UUCACAGUGGCUAAGUUCUGC -63
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