MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-217

Family name MIR-217 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-217
Paralogues
Orthologues Aca-Mir-217-v1  Ami-Mir-217-v1  Bfl-Mir-217  Bla-Mir-217  Bta-Mir-217-v1  Cfa-Mir-217-v1  Cja-Mir-217-v1  Cli-Mir-217-v1  Cmi-Mir-217  Cpi-Mir-217-v1  Cpo-Mir-217-v1  Dno-Mir-217-v1  Dre-Mir-217-v1  Eca-Mir-217-v1  Ete-Mir-217-v1  Gga-Mir-217-v1  Gja-Mir-217-v1  Gmo-Mir-217  Hsa-Mir-217-v1  Laf-Mir-217  Lch-Mir-217  Loc-Mir-217  Mal-Mir-217  Mdo-Mir-217  Mml-Mir-217-v1  Mmr-Mir-217  Mun-Mir-217-v1  Neu-Mir-217-v1  Oan-Mir-217-v1  Ocu-Mir-217-v1  Pab-Mir-217-v1  Pbv-Mir-217-v1  Rno-Mir-217-v1  Sha-Mir-217-v1  Spt-Mir-217  Sto-Mir-217-v1  Tgu-Mir-217-v1  Tni-Mir-217  Xtr-Mir-217-v1 
Node of Origin (locus) Chordata
Node of Origin (family) Chordata
Genome context
(mm10)		 chr11: 28763761-28763819 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-217-v1)		 Mir-216-P2a chr11: 28746204-28746265 [+] UCSC Ensembl
Mir-216-P2b chr11: 28757018-28757079 [+] UCSC Ensembl
Mir-217-v2 chr11: 28763760-28763820 [+] UCSC Ensembl
Mir-217-v1 chr11: 28763761-28763819 [+] UCSC Ensembl
Variant

Mmu-Mir-217-v1
Seed ACUGCAU
Precursor
(pre-Mir +30nt flank)		 
CAUAGUCAUUACAGUUUUUGAUGUUGCAGAUACUGCAUCAGGAACUGACUGGAUAAGACUUAAUCCCCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACAACCACCAGCAAACAC
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Structure
        10          20        30        40        50         
CAUAGUCAUUACAGUUUUU--|      C  A  C     C         C   AUAAGA 
                     GAUGUUG AG UA UGCAU AGGAACUGA UGG      C
                     CUACGAC UC GU ACGUA UCCUUGACU ACC      U
CACAAACGACCACCAACAAAU^      U  C  U     A         -   CCUAAU 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-217-v1_5p
mirBase accessionMIMAT0000679
Sequence 
0- UACUGCAUCAGGAACUGACUGGA -23
Get sequence
Proposed targets microrna.org: MIMAT0000679
TargetScanVert: mmu-miR-217-5p
miRDB: MIMAT0000679
Star sequence

Mmu-Mir-217-v1_3p*
mirBase accessionMIMAT0017072
Sequence 
37- CAUCAGUUCCUAAUGCAUUGCC -59
Get sequence
Proposed targets TargetScanVert: mmu-miR-217-3p
miRDB: MIMAT0017072
Variant

Mmu-Mir-217-v2
Seed UACUGCA
Precursor
(pre-Mir +30nt flank)		 
ACAUAGUCAUUACAGUUUUUGAUGUUGCAGAUACUGCAUCAGGAACUGACUGGAUAAGACUUAAUCCCCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACAACCACCAGCAAACACC
Get precursor sequence
Structure
        10        20          30        40        50        60
ACAUAGUCAUUACAGUUUUU--|      C  A  C     C         C   AUAAGA 
                      GAUGUUG AG UA UGCAU AGGAACUGA UGG      C
                      CUACGAC UC GU ACGUA UCCUUGACU ACC      U
CCACAAACGACCACCAACAAAU^      U  C  U     A         -   CCUAAU 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-217-v2_5p
mirBase accessionMIMAT0000679
Sequence 
0- AUACUGCAUCAGGAACUGACUGG -23
Get sequence
Proposed targets microrna.org: MIMAT0000679
TargetScanVert: mmu-miR-217-5p
miRDB: MIMAT0000679
Star sequence

Mmu-Mir-217-v2_3p*
mirBase accessionMIMAT0017072
Sequence 
39- AUCAGUUCCUAAUGCAUUGCCU -61
Get sequence
Proposed targets TargetScanVert: mmu-miR-217-3p
miRDB: MIMAT0017072