MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-15-P1b

Family name MIR-15 (all species)
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-15-P1a  Mun-Mir-15-P1c  Mun-Mir-15-P2a  Mun-Mir-15-P2b  Mun-Mir-15-P2c 
Orthologues Aca-Mir-15-P1b  Ami-Mir-15-P1b  Bta-Mir-15-P1b  Cfa-Mir-15-P1b  Cin-Mir-15-P1  Cja-Mir-15-P1b  Cli-Mir-15-P1b  Cmi-Mir-15-P1b  Cpi-Mir-15-P1b  Cpo-Mir-15-P1b  Dno-Mir-15-P1b  Dre-Mir-15-P1b  Eca-Mir-15-P1b  Ete-Mir-15-P1b  Gga-Mir-15-P1b  Gja-Mir-15-P1b  Gmo-Mir-15-P1b  Hsa-Mir-15-P1b  Laf-Mir-15-P1b  Lch-Mir-15-P1b  Loc-Mir-15-P1b  Mal-Mir-15-P1b  Mml-Mir-15-P1b  Mmr-Mir-15-P1b  Mmu-Mir-15-P1b  Oan-Mir-15-P1b  Ocu-Mir-15-P1b  Pab-Mir-15-P1b  Pbv-Mir-15-P1b  Rno-Mir-15-P1b  Sha-Mir-15-P1b  Spt-Mir-15-P1b  Sto-Mir-15-P1b  Tgu-Mir-15-P1b  Tni-Mir-15-P1b  Xla-Mir-15-P1b1  Xla-Mir-15-P1b2  Xtr-Mir-15-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_901765095.2_aMicUni1.2)		 LR594641.1: 189221907-189221966 [+]
Clustered miRNAs
(< 50kb from Mir-15-P1b)		 Mir-15-P1b LR594641.1: 189221907-189221966 [+]
Mir-15-P2b LR594641.1: 189222104-189222168 [+]
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
UAUCCUGUGACAAAGGACCUUAAAAUACUAUAGCAGCACAUCAUGGUUUGCAUGCUGUAACAAAAAUGCUAAUCAUUAUUUGCUGCUUUGGAACUUUAAGGAAAAGAAACUGUGAAUCUC
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Structure
        10          20        30        40        50         
UAUCCUGUGACAAAGGA--|      AUA   U       C  C      U   UGCUGU 
                   CCUUAAA   CUA AGCAGCA AU AUGGUU GCA      A
                   GGAAUUU   GGU UCGUCGU UA UACUAA CGU      A
CUCUAAGUGUCAAAGAAAA^      CAA   U       U  U      U   AAAAAC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
- +
To
Mature sequence

Mun-Mir-15-P1b_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACAUCAUGGUUUGCA -22
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Star sequence

Mun-Mir-15-P1b_3p*
mirBase accessionNone
Sequence 
38- CUAAUCAUUAUUUGCUGCUUUG -60
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