MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-181-P1a

Family name MIR-181 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-181-P1b  Neu-Mir-181-P1c  Neu-Mir-181-P2a  Neu-Mir-181-P2b  Neu-Mir-181-P2c 
Orthologues Aca-Mir-181-P1a  Ami-Mir-181-P1a  Bta-Mir-181-P1a  Cfa-Mir-181-P1a  Cja-Mir-181-P1a  Cli-Mir-181-P1a  Cmi-Mir-181-P1a  Cpi-Mir-181-P1a  Cpo-Mir-181-P1a  Dno-Mir-181-P1a  Dre-Mir-181-P1a1  Dre-Mir-181-P1a2  Eca-Mir-181-P1a  Ete-Mir-181-P1a  Gga-Mir-181-P1a  Gja-Mir-181-P1a  Gmo-Mir-181-P1a1  Hsa-Mir-181-P1a  Laf-Mir-181-P1a  Lch-Mir-181-P1a  Loc-Mir-181-P1a  Mal-Mir-181-P1a1  Mdo-Mir-181-P1a  Mml-Mir-181-P1a  Mmr-Mir-181-P1a  Mmu-Mir-181-P1a  Mun-Mir-181-P1a  Oan-Mir-181-P1a  Ocu-Mir-181-P1a  Pab-Mir-181-P1a  Rno-Mir-181-P1a  Sha-Mir-181-P1a  Spt-Mir-181-P1a  Sto-Mir-181-P1a  Tgu-Mir-181-P1a  Tni-Mir-181-P1a1  Xla-Mir-181-P1a3  Xla-Mir-181-P1a4  Xtr-Mir-181-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051814.1: 442067801-442067862 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1a)		 Mir-181-P1a CM051814.1: 442067801-442067862 [+] UCSC Ensembl
Mir-181-P2a CM051814.1: 442067988-442068048 [+] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
AAUUCUGAGUUUUUUGAGGUUGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUGGAAUUAAAAUGAAAACCAUCGACCGUUGAUUGUACCCUACAGCUAACCGCCAUCAUCCUCCUUCUA
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Structure
        10         20         30        40        50        60  
AAUUCUGAGUUUUUUGA-    -|  UC  UGA   U      CU       A  UUGGAAUU 
                  GGUU GCU  AG   ACA UCAACG  GUCGGUG GU        \
                  CCAA CGA  UC   UGU AGUUGC  CAGCUAC CA        A
AUCUUCCUCCUACUACCG    U^  CA  CCA   U      --       -  AAAGUAAA 
120       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-181-P1a_5p
mirBase accessionNone
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Star sequence

Neu-Mir-181-P1a_3p*
mirBase accessionNone
Sequence 
40- ACCAUCGACCGUUGAUUGUACC -62
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