MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-92-P2a

Family name MIR-92 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID
Paralogues Rno-Mir-92-P1a  Rno-Mir-92-P1c  Rno-Mir-92-P1d  Rno-Mir-92-P2c  Rno-Mir-92-P2d 
Orthologues Aca-Mir-92-P2a  Ami-Mir-92-P2a  Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2a  Cel-Mir-92  Cfa-Mir-92-P2a  Cja-Mir-92-P2a  Cli-Mir-92-P2a  Cmi-Mir-92-P2a  Cpi-Mir-92-P2a  Cpo-Mir-92-P2a  Dno-Mir-92-P2a  Eca-Mir-92-P2a  Esc-Mir-92  Ete-Mir-92-P2a  Gga-Mir-92-P2a  Gja-Mir-92-P2a  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P2a  Isc-Mir-92  Laf-Mir-92-P2a  Mdo-Mir-92-P2a  Mml-Mir-92-P2a  Mmr-Mir-92-P2a  Mmu-Mir-92-P2a  Mun-Mir-92-P2a  Neu-Mir-92-P2a  Oan-Mir-92-P2a  Obi-Mir-92  Ocu-Mir-92-P2a  Pab-Mir-92-P2a  Sha-Mir-92-P2a  Sme-Mir-92  Spt-Mir-92-P2a  Sto-Mir-92-P2a  Tgu-Mir-92-P2a  Xla-Mir-92-P2a  Xtr-Mir-92-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(rn6)		 chr2: 231875463-231875522 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P2a)		 Mir-430-P1 chr2: 231874984-231875043 [+] UCSC Ensembl
Mir-430-P3 chr2: 231875231-231875291 [+] UCSC Ensembl
Mir-430-P4 chr2: 231875359-231875416 [+] UCSC Ensembl
Mir-92-P2a chr2: 231875463-231875522 [+] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
UCCCUGGGCGGCAUGAGGACCAAGGCCGUCACUGCUGCUAAUCUGCAACUCUGUUGAGCACACACUGGAAUUGCACUUUAGCAAUGGUGAUGGAGUGUGUCGGUGGCACGGAGAAGGAAC
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Structure
        10          20         30        40        50         
UCCCUGGGCGGCAUGAG--   -| AGG        GC      UC     C   GUUGAG 
                   GAC CA   CCGUCACU  UGCUAA  UGCAA UCU      C
                   CUG GU   GGUAGUGG  ACGAUU  ACGUU AGG      A
CAAGGAAGAGGCACGGUGG   U^ GA-        UA      UC     A   UCACAC 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
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Star sequence

Rno-Mir-92-P2a_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUGCUGCUAAUCUGCAACUCU -22
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Mature sequence

Rno-Mir-92-P2a_3p (predicted)
mirBase accessionNone
Sequence 
38- AAUUGCACUUUAGCAAUGGUGA -60
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