| MirGeneDB ID | Spt-Mir-459 |
|---|---|
| Family name | MIR-459 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Ami-Mir-459 Bta-Mir-459 Cfa-Mir-459 Cja-Mir-459 Cli-Mir-459 Cpi-Mir-459 Cpo-Mir-459 Dno-Mir-459 Dre-Mir-459 Ebu-Mir-459 Eca-Mir-459 Ete-Mir-459 Gmo-Mir-459 Hsa-Mir-459 Laf-Mir-459 Loc-Mir-459 Mal-Mir-459 Mml-Mir-459 Mmr-Mir-459 Mmu-Mir-459 Mun-Mir-459 Oan-Mir-459 Ocu-Mir-459 Pab-Mir-459 Pma-Mir-459 Rno-Mir-459 Sto-Mir-459 Tni-Mir-459 Xla-Mir-459-P1 Xla-Mir-459-P2 Xtr-Mir-459 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01015537.1: 853274-853334 [+] UCSC Ensembl |
| Seed | CAGUAAC |
| Precursor (pre-Mir +30nt flank) |
AACUUAGCAUGAGGCUGCUGUUUCUUGCAAUCAGUAACAAAGAUUUAUCUCUGUGUUUGAUCAAUGGCAGGGAGAAUCUUUGUCACUGAGUGAAAUUGACAGUUAUUCAACAUGUGAUCAGGet precursor sequence |
| Structure | 10 20 30 40 50 60 AACUUAGCAUGAGGCUG--| UCUUG A A A GUUUG CUGUU CA UCAGU ACAAAGAUUU UCUCUGU A GACAG GU AGUCA UGUUUCUAAG AGGGACG U GACUAGUGUACAACUUAUU^ UUAAA G C - GUAAC . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Spt-Mir-459_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCAGUAACAAAGAUUUAUCUCUGU -24
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|
| Star sequence | Spt-Mir-459_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- AGGGAGAAUCUUUGUCACUGAGU -61
Get sequence
|
