MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-459

Family name MIR-459 (all species)
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chrUn_NW_016685808v1: 496-556 [-] UCSC Ensembl
Seed CAGUAAC
Precursor
(pre-Mir +30nt flank)		 
GUAAUGUUUCCCAAAUCUGCUUUUUUGCUCUCAGUAACAACGAUUCAGCCUUGUCAUUAUUAUAUAACCAAGGGGAUCUUUGUCACUAAGUGCAAUUAAUAGCAACAUACGACAAGCCACC
Get precursor sequence
Structure
        10        20          30        40        50        60 
GUAAUGUUUCCCAAAUCU   UUU--|   U  C   A    C     AG     UCAUUAU 
                  GCU     UUGC CU AGU ACAA GAUUC  CCUUG       \
                  CGA     AACG GA UCA UGUU CUAGG  GGAAC       U
CCACCGAACAGCAUACAA   UAAUU^   U  A   C    U     --     CAAUAUA 
 .       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
- +
An Br Em Em He Ve
Mature sequence

Xtr-Mir-459_5p
mirBase accessionNone
Sequence 
0- UCAGUAACAACGAUUCAGCCUUGU -24
Get sequence
Star sequence

Xtr-Mir-459_3p* (predicted)
mirBase accessionNone
Sequence 
39- AAGGGGAUCUUUGUCACUAAGU -61
Get sequence