MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-1990-P1

Family name MIR-1990 (all species)
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues Agr-Mir-1990-P2 
Orthologues Cte-Mir-1990-P1  Eba-Mir-1990-P1  Efe-Mir-1990-o1  Efe-Mir-1990-P1  Lan-Mir-1990-P1  Ofu-Mir-1990-P1  Pdu-Mir-1990-P1  War-Mir-1990-P1 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granulata)		 JABBOT010000001.1: 14814918-14814979 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1990-P1)		 Mir-1986 JABBOT010000001.1: 14813799-14813856 [-] Ensembl
Mir-1990-P2 JABBOT010000001.1: 14814051-14814107 [-] Ensembl
Mir-1990-P1 JABBOT010000001.1: 14814918-14814979 [-] Ensembl
Seed CGGGACU
Precursor
(pre-Mir +30nt flank)		 
ACAGGGUACAUUCACCUUUCGGGGCCUUUCUGUAAAUUGACAUAGUCCCUGGGUUAGUUAAAAAGAAACUCGGGACUGCGUCAAUUUAAGGAUAGACCACGAAACAGUCAACACCUAUAAGA
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Structure
        10          20        30        40        50        60 
ACAGGGUACAUUCACCU--|   G  C  U   G         A       U    UAGUUA 
                   UUCG GG CU UCU UAAAUUGAC UAGUCCC GGGU      \
                   AAGC CC GA AGG AUUUAACUG GUCAGGG CUCA      A
AGAAUAUCCACAACUGACA^   A  A  U   A         C       -    AAGAAA 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Agr-Mir-1990-P1_5p*
mirBase accessionNone
Sequence 
0- UGUAAAUUGACAUAGUCCCUGGGU -24
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Mature sequence

Agr-Mir-1990-P1_3p
mirBase accessionNone
Sequence 
39- UCGGGACUGCGUCAAUUUAAGGA -62
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